Applied Bioinformatics [Nucleotides]

Nucleotide nomenclature (IUPAC)

SymbolMeaningOrigin of designation
GGGuanine
AAAdenine
TTThymine
CCCytosine
RG or ApuRine
YT or CpYrimidine
MA or CaMino
KG or TKeto
SG or CStrong interaction (3 H bonds)
WA or TWeak interaction (2 H bonds)
HA or C or Tnot-G, H follows G in the alphabet
BG or T or Cnot-A, B follows A
VG or C or Anot-T (not-U), V follows U
DG or A or Tnot-C, D follows C
NG or A or T or CaNy

Complete IUPAC nomenclatur for bases in nucleic acids


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