Applied Bioinformatics [Amino acids]

Amino acid nomenclature (IUPAC)

Trivial namea Symbolsb Systematic namec Formula
AlanineAlaA2-Aminopropanoic acid CH3-CH(NH2)-COOH
ArginineArgR2-Amino-5-guanidinopentanoic
acid
H2N-C(=NH)-NH-[CH2]3-CH(NH2)-COOH
AsparagineAsndN d2-Amino-3-carbamoylpropanoic acid H2N-CO-CH2-CH(NH2)-COOH
Aspartic acidAspdD d2-Aminobutanedioic
acid
HOOC-CH2-CH(NH2)-COOH
CysteineCysC2-Amino-3-mercaptopropanoic
acid
HS-CH2-CH(NH2)-COOH
GlutamineGlndQd2-Amino-4-carbamoylbutanoic
acid
H2N-CO-[CH2]2-CH(NH2)-COOH
Glutamic acidGludE d2-Aminopentanedioic acid HOOC-[CH2]2-CH(NH2)-COOH
GlycineGlyGAminoethanoic acid CH2(NH2)-COOH
HistidineHisH2-Amino-3-(1H-imidazol-4-yl)-
propanoic acid
IsoleucineIleI2-Amino-3-methylpentanoic
acide
C2H5-CH(CH3)-CH(NH2)-COOH
LeucineLeuL2-Amino-4-methylpentanoic
acid
(CH3)2CH-CH2-CH(NH2)-COOH
LysineLysK2,6-Diaminohexanoic acid H2N-[CH2]4-CH(NH2)-COOH
MethionineMetM2-Amino-4-(methylthio)butanoic
acid
CH3-S-[CH2]2-CH(NH2)-COOH
PhenylalaninePheF2-Amino-3-phenylpropanoic
acid
C6H5-CH2-CH(NH2)-COOH
ProlineProPPyrrolidine-2-carboxylic acid
SerineSerS2-Amino-3-hydroxypropanoic
acid
HO-CH2-CH(NH2)-COOH
ThreonineThrT2-Amino-3-hydroxybutanoic
acid e
CH3-CH(OH)-CH(NH2)-COOH
TryptophanTrpW2-Amino-3-(lH-indol-3-yl)-
propanoic acid
TyrosineTyrY2-Amino-3-(4-hydroxyphenyl)-
propanoic acid
ValineValV2-Amino-3-methylbutanoic
acid
(CH3)2CH-CH(NH2)-COOH
Unspecified amino
acid
XaaXf

Complete IUPAC nomenclature for amino acids


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